An apparatus and method improves the fault tolerance of a rocket or missile guidance system which includes a resonant sensor. When improper initialization is detected, the resonant sensor is reinitialized, repeatedly if necessary, until normal operation is achieved. Improper initialization is detected by comparing data from the guidance system with pre-specified physical limits to roll, pitch, yaw, and/or other features of the flight scenario. Embodiments can also detect a fault condition due to an error signal from a "Built-in-Test" (BIT) module. The initialization sequence initiated by the invention can be identical to the power-on sequence, or it can be a separate, reinitiating sequence. Subsequent resets are initiated as needed, for example until the burn of the rocket fuel and the associated vibrations have ceased and the resonant sensor has been successfully initialized.